Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889187.1_cds_XP_016443883.1_39002
CDS Infomation

[gene=LOC107769197] [db_xref=GeneID:107769197] [protein=3-ketoacyl-CoA thiolase 2, peroxisomal-like] [protein_id=XP_016443883.1] [location=complement(join(60526..60635,60728..60811,61152..61260,61343..61466,62170..62266,62344..62476,62560..62637,62721..62828,62917..62984,63069..63167,63407..63533,63927..64011,64102..64178,65837..65944,66058..66111))] [gbkey=CDS]
Sequence

ATGTGCATTATACTACCACCAATTACCCCACGTATTCCACTAAATTTCGTGCAGGAAGAA
GAAGAAGAAAGAAAAATGGAAAAAGCTATTGAAAGGCAGAGAGTTCTACTGGAGCACCTT
CAGCCCATTCGTTCTTCTTCTCACCAGTTTTCTTCTCTCACTCCATCAATTTGTTTAGCT
GGTGACAGTGCTGCATATCAAAGGACGGCTGCTTTTGGTGATGATGTTGTCATTGTTGCA
GCTTATCGTACTGCTATTTGTAAAGCGAAACGTGGAGGTTTTAAAAATACCCTAGCAGAT
GATCTACTTGCTCCAGTTCTGAAGGCAGTAGTAGAGAAAACTAACCTGAGTCCGAATGAG
GTGGGAGATATTGTTGTTGGTACGGTTTTGGCACCAGGCTCACTAAGAGCAATGGAGTGC
AGGATGGCTGCATTTTATGCAGGGTTCCCAGAAACTGTCCCAATCAGAACTGTGAACAGG
CAATGTTCTTCTGGCCTCCAGGCCGTTGCTGATGTAGCTGCATCAATAAAAGCAGGATTC
TATGACATAGGCATTGGTGCTGGACTAGAGTTAATGACAGTTGACAATATTGGAAGAGTT
CAACAAGTTAATCCGAAAGTAGATGCATTTGCACAAGCCCGTGACTGCCTTCTTCCTATG
GGCATTACTTCTGAGAATGTCGCCCAACGTTTTGGAGTGACACGGCTAGAACAAGACCAG
GCTGCTGTTATTTCTCACCAGCGAGCTGCTGCAGCAACTGCATCTGGAAAATTCAAAGAT
GAGATTATCCCAGTATTGACAAAGATCGTGGACCCACAAACTCGAAGGGAGAAACCCGTT
GTGATTTCTGTAGATGATGGCATTCGGCCAAACACAAATTTGACAAACCTGGCAAAGCTG
AAACCTGCATTCAAAAGCGACGGAACCACAACTGCAGGGACTGCTAGCCAGGTCAGTGAT
GGTGCGGCTGCAGTGCTTCTTATGAAGAGAAGTGTAGCTATGCAGAAGGGACTTCCAATT
CTTGGCGTATTCAGGAGCTTTGCTGCTGTTGGCGTGGATCCTGCTGTAATGGGAATTGGC
CCAGCCGTTGCTATACCAGCTGCTGTTAAGTCTGCTGGTCTTGAGCTTGACAATATTGAC
CTGTTTGAAATAAACGAGGCATTTGCATCCCAGTTTGTGTATTGCCGCAAGAAACTCAAT
CTTGACTCTGAAAAGGTTAATGTGAATGGAGGGGCAATGGCTCTTGGGCATCCTCTGGGT
GCTACAGGTGCACGTTGCGTGGCAACTCTGCTTCATGAGATGAAACGTCGTGGCAAAGAC
TGCCGCTTTGGTGTGATTTCCATGTGCATAGGTTCTGGGATGGGGGCTGCTGCAGTGTTT
GAAAGAGGGGATGCTGTAGACGACTTATGCAATGCTCGAGTCAACAATAACAACAATTTC
TTGTCCAAGGATGCCAAATGA

Peptide Sequence

PEP ID

XP_016443883.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Nicotiana tabacum]
Sequence

MCIILPPITPRIPLNFVQEEEEERKMEKAIERQRVLLEHLQPIRSSSHQFSSLTPSICLA
GDSAAYQRTAAFGDDVVIVAAYRTAICKAKRGGFKNTLADDLLAPVLKAVVEKTNLSPNE
VGDIVVGTVLAPGSLRAMECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAASIKAGF
YDIGIGAGLELMTVDNIGRVQQVNPKVDAFAQARDCLLPMGITSENVAQRFGVTRLEQDQ
AAVISHQRAAAATASGKFKDEIIPVLTKIVDPQTRREKPVVISVDDGIRPNTNLTNLAKL
KPAFKSDGTTTAGTASQVSDGAAAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIG
PAVAIPAAVKSAGLELDNIDLFEINEAFASQFVYCRKKLNLDSEKVNVNGGAMALGHPLG
ATGARCVATLLHEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDAVDDLCNARVNNNNNF
LSKDAK

Transcript Sequence

Gene sequence data has not been registered.